SELECT 
  cscart_product_prices.product_id, 
  MIN(
    IF(
      cscart_product_prices.percentage_discount = 0, 
      cscart_product_prices.price, 
      cscart_product_prices.price - (
        cscart_product_prices.price * cscart_product_prices.percentage_discount
      )/ 100
    )
  ) AS price 
FROM 
  cscart_product_prices 
WHERE 
  cscart_product_prices.product_id IN (
    2029, 2027, 2026, 2025, 2013, 2012, 1241, 
    1229, 1226, 1150, 1149, 1145, 1136, 
    1135, 1134, 1133, 1132, 932, 931, 930, 
    929, 928, 927, 517
  ) 
  AND cscart_product_prices.lower_limit = 1 
  AND cscart_product_prices.usergroup_id IN (0, 1) 
GROUP BY 
  cscart_product_prices.product_id

Query time 0.00044

JSON explain

{
  "query_block": {
    "select_id": 1,
    "cost_info": {
      "query_cost": "17.26"
    },
    "grouping_operation": {
      "using_filesort": false,
      "table": {
        "table_name": "cscart_product_prices",
        "access_type": "range",
        "possible_keys": [
          "usergroup",
          "product_id",
          "lower_limit",
          "usergroup_id"
        ],
        "key": "product_id",
        "used_key_parts": [
          "product_id"
        ],
        "key_length": "3",
        "rows_examined_per_scan": 25,
        "rows_produced_per_join": 4,
        "filtered": "19.94",
        "index_condition": "(`wearethehelpful_scalesta_net`.`cscart_product_prices`.`product_id` in (2029,2027,2026,2025,2013,2012,1241,1229,1226,1150,1149,1145,1136,1135,1134,1133,1132,932,931,930,929,928,927,517))",
        "cost_info": {
          "read_cost": "16.76",
          "eval_cost": "0.50",
          "prefix_cost": "17.26",
          "data_read_per_join": "119"
        },
        "used_columns": [
          "product_id",
          "price",
          "percentage_discount",
          "lower_limit",
          "usergroup_id"
        ],
        "attached_condition": "((`wearethehelpful_scalesta_net`.`cscart_product_prices`.`lower_limit` = 1) and (`wearethehelpful_scalesta_net`.`cscart_product_prices`.`usergroup_id` in (0,1)))"
      }
    }
  }
}

Result

product_id price
517 75.00000000
927 120.00000000
928 200.00000000
929 280.00000000
930 120.00000000
931 200.00000000
932 280.00000000
1132 59.04000000
1133 21.00000000
1134 35.00000000
1135 48.96000000
1136 21.00000000
1145 19.95000000
1149 19.50000000
1150 9.95000000
1226 9.95000000
1229 9.95000000
1241 9.95000000
2012 250.00000000
2013 200.00000000